OSIRIS v1.1

This is our first implementation of OSIRIS, which is based in PubMed searches. For an improved recognition of sequence variants of genes in text, try OSIRISv1.2, that implements our NER algorithm for sequence variants. Go to the new version of OSIRIS by clicking here

Information about first implementation of OSIRIS can be found at:

Bonis J, Furlong LI, Sanz F. OSIRIS: a tool for retrieving literature about sequence variants. Bioinformatics 2006 22: 2567-2569; doi:10.1093/bioinformatics/btl421
Abstract
PDF
Supplementary Material

This work was carried out in the Integrative Biomedical Informatics Group of the Research Unit on Biomedical Informatics (GRIB), which belongs to the Institut Municipal d´Investigació Médica (IMIM) and the Universitat Pompeu Fabra (UPF), and is located at the Barcelona Biomedical Research Park (PRBB). It has been funded in part by the INBIOMED and INFOBIOMED networks.

Back to IBI resources page.

Comments and suggestions: Laura Furlong (lfurlong@imim.es)

Updated: February, 2007
Laura I. Furlong